Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ClpxQ9JHS4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.61■□□□□ 0.25
ClpxQ9JHS4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClpxQ9JHS4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClpxQ9JHS4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.59■□□□□ 0.25
ClpxQ9JHS4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClpxQ9JHS4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ClpxQ9JHS4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ClpxQ9JHS4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ClpxQ9JHS4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ClpxQ9JHS4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ClpxQ9JHS4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClpxQ9JHS4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClpxQ9JHS4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms