Protein–RNA interactions for Protein: Q9JHE7

Tssc4, Protein TSSC4, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tssc4Q9JHE7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tssc4Q9JHE7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Tssc4Q9JHE7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Tssc4Q9JHE7 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tssc4Q9JHE7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tssc4Q9JHE7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tssc4Q9JHE7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tssc4Q9JHE7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms