Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Fst-202ENSMUST00000223640 2612 ntBASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Gm6420-201ENSMUST00000193885 723 ntBASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubb3Q9ERD7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Gm27011-201ENSMUST00000182352 972 ntBASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubb3Q9ERD7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubb3Q9ERD7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubb3Q9ERD7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubb3Q9ERD7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubb3Q9ERD7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms