Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr3Q9DCF9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr3Q9DCF9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr3Q9DCF9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssr3Q9DCF9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ssr3Q9DCF9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ssr3Q9DCF9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssr3Q9DCF9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms