Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cdc40Q9DC48 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdc40Q9DC48 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Gm20049-201ENSMUST00000219950 730 ntBASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdc40Q9DC48 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Gm8520-201ENSMUST00000186517 868 ntBASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.85■□□□□ 0.29
Cdc40Q9DC48 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.85■□□□□ 0.29
Cdc40Q9DC48 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdc40Q9DC48 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdc40Q9DC48 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cdc40Q9DC48 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.83■□□□□ 0.29
Cdc40Q9DC48 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdc40Q9DC48 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms