Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Gm38205-201ENSMUST00000192243 258 ntBASIC17.3■□□□□ 0.36
Cntd1Q9D995 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntd1Q9D995 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.29■□□□□ 0.36
Cntd1Q9D995 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Gm8969-201ENSMUST00000199694 526 ntBASIC17.29■□□□□ 0.36
Cntd1Q9D995 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntd1Q9D995 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntd1Q9D995 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.28■□□□□ 0.36
Cntd1Q9D995 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.28■□□□□ 0.36
Cntd1Q9D995 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.28■□□□□ 0.36
Cntd1Q9D995 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntd1Q9D995 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.28■□□□□ 0.36
Cntd1Q9D995 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntd1Q9D995 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cntd1Q9D995 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.27■□□□□ 0.35
Cntd1Q9D995 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cntd1Q9D995 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.26■□□□□ 0.35
Cntd1Q9D995 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.26■□□□□ 0.35
Cntd1Q9D995 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.26■□□□□ 0.35
Cntd1Q9D995 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.25■□□□□ 0.35
Cntd1Q9D995 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.25■□□□□ 0.35
Cntd1Q9D995 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntd1Q9D995 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms