Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap3Q9D706 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap3Q9D706 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap3Q9D706 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rpap3Q9D706 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.07■□□□□ 0.8
Rpap3Q9D706 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rpap3Q9D706 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.05■□□□□ 0.8
Rpap3Q9D706 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Gm43183-201ENSMUST00000200632 547 ntBASIC20.05■□□□□ 0.8
Rpap3Q9D706 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.05■□□□□ 0.8
Rpap3Q9D706 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.05■□□□□ 0.8
Rpap3Q9D706 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
Rpap3Q9D706 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap3Q9D706 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.04■□□□□ 0.8
Rpap3Q9D706 Gm42545-201ENSMUST00000202755 922 ntBASIC20.04■□□□□ 0.8
Rpap3Q9D706 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpap3Q9D706 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap3Q9D706 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.02■□□□□ 0.8
Rpap3Q9D706 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Rpap3Q9D706 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpap3Q9D706 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rpap3Q9D706 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.01■□□□□ 0.79
Rpap3Q9D706 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.01■□□□□ 0.79
Rpap3Q9D706 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpap3Q9D706 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap3Q9D706 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rpap3Q9D706 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpap3Q9D706 Gm37292-201ENSMUST00000192062 758 ntBASIC20■□□□□ 0.79
Rpap3Q9D706 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20■□□□□ 0.79
Rpap3Q9D706 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap3Q9D706 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20■□□□□ 0.79
Rpap3Q9D706 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap3Q9D706 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap3Q9D706 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.99■□□□□ 0.79
Rpap3Q9D706 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms