Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
5530400C23RikQ9D3I0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
5530400C23RikQ9D3I0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
5530400C23RikQ9D3I0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
5530400C23RikQ9D3I0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
5530400C23RikQ9D3I0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
5530400C23RikQ9D3I0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
5530400C23RikQ9D3I0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
5530400C23RikQ9D3I0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Gm12933-201ENSMUST00000120203 872 ntBASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
5530400C23RikQ9D3I0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
5530400C23RikQ9D3I0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
5530400C23RikQ9D3I0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms