Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snrnp48Q9D361 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snrnp48Q9D361 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snrnp48Q9D361 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snrnp48Q9D361 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snrnp48Q9D361 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snrnp48Q9D361 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp48Q9D361 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp48Q9D361 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Rab3c-203ENSMUST00000224180 967 ntBASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp48Q9D361 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp48Q9D361 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.1■□□□□ 0.49
Snrnp48Q9D361 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Gm10602-201ENSMUST00000098239 609 ntBASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp48Q9D361 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms