Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim42Q9D2H5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Gm14117-201ENSMUST00000122417 843 ntBASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim42Q9D2H5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim42Q9D2H5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim42Q9D2H5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim42Q9D2H5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Golgb1-201ENSMUST00000023534 498 ntBASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim42Q9D2H5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim42Q9D2H5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim42Q9D2H5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms