Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Upk1aQ9D132 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upk1aQ9D132 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upk1aQ9D132 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.27■□□□□ 0.35
Upk1aQ9D132 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Gm38205-201ENSMUST00000192243 258 ntBASIC17.26■□□□□ 0.35
Upk1aQ9D132 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.26■□□□□ 0.35
Upk1aQ9D132 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upk1aQ9D132 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.26■□□□□ 0.35
Upk1aQ9D132 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1aQ9D132 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Gm45417-201ENSMUST00000209533 758 ntBASIC17.24■□□□□ 0.35
Upk1aQ9D132 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1aQ9D132 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.23■□□□□ 0.35
Upk1aQ9D132 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.23■□□□□ 0.35
Upk1aQ9D132 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1aQ9D132 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Gm40848-201ENSMUST00000221998 324 ntBASIC17.22■□□□□ 0.35
Upk1aQ9D132 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1aQ9D132 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms