Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssbp3Q9D032 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssbp3Q9D032 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssbp3Q9D032 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssbp3Q9D032 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Gm13168-201ENSMUST00000121771 632 ntBASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Gm27275-201ENSMUST00000184318 272 ntBASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssbp3Q9D032 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Ssbp3Q9D032 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssbp3Q9D032 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssbp3Q9D032 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssbp3Q9D032 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.08■□□□□ 0
Ssbp3Q9D032 Gm2399-201ENSMUST00000104944 225 ntBASIC15.08■□□□□ 0
Ssbp3Q9D032 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.08■□□□□ 0
Ssbp3Q9D032 Gm22240-201ENSMUST00000175225 82 ntBASIC15.08■□□□□ 0
Ssbp3Q9D032 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssbp3Q9D032 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssbp3Q9D032 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssbp3Q9D032 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ssbp3Q9D032 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssbp3Q9D032 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.08■□□□□ 0
Ssbp3Q9D032 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms