Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shmt2Q9CZN7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.33■□□□□ 0.36
Shmt2Q9CZN7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shmt2Q9CZN7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shmt2Q9CZN7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shmt2Q9CZN7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.29■□□□□ 0.36
Shmt2Q9CZN7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms