Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1lQ9CXF7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Tgds-204ENSMUST00000228543 1594 ntBASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd1lQ9CXF7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd1lQ9CXF7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.52■□□□□ 0.87
Chd1lQ9CXF7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd1lQ9CXF7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.51■□□□□ 0.87
Chd1lQ9CXF7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.5■□□□□ 0.87
Chd1lQ9CXF7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd1lQ9CXF7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms