Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Gm42642-201ENSMUST00000200683 355 ntBASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc43Q9CR29 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.21■□□□□ 0.83
Ccdc43Q9CR29 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Ccdc43Q9CR29 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc43Q9CR29 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Gm13534-201ENSMUST00000121169 513 ntBASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.18■□□□□ 0.82
Ccdc43Q9CR29 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Gm18284-201ENSMUST00000172604 624 ntBASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc43Q9CR29 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Gm7514-201ENSMUST00000209475 934 ntBASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Gm10033-202ENSMUST00000211874 928 ntBASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc43Q9CR29 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms