Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm7Q9CQQ8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.38■□□□□ 0.53
Lsm7Q9CQQ8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm7Q9CQQ8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm7Q9CQQ8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm7Q9CQQ8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm7Q9CQQ8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms