Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Gtf2ird2Q99NI3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.66■□□□□ 0.58
Gtf2ird2Q99NI3 Flg-201ENSMUST00000050758 1488 ntBASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf2ird2Q99NI3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.58
Gtf2ird2Q99NI3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gtf2ird2Q99NI3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf2ird2Q99NI3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms