Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raf1Q99N57 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raf1Q99N57 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Raf1Q99N57 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Gm11421-201ENSMUST00000122124 294 ntBASIC16.28■□□□□ 0.2
Raf1Q99N57 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.28■□□□□ 0.2
Raf1Q99N57 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Raf1Q99N57 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raf1Q99N57 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Raf1Q99N57 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raf1Q99N57 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Raf1Q99N57 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.27■□□□□ 0.19
Raf1Q99N57 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Raf1Q99N57 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Raf1Q99N57 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Raf1Q99N57 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Raf1Q99N57 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Raf1Q99N57 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Raf1Q99N57 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.26■□□□□ 0.19
Raf1Q99N57 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.26■□□□□ 0.19
Raf1Q99N57 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.26■□□□□ 0.19
Raf1Q99N57 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.26■□□□□ 0.19
Raf1Q99N57 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raf1Q99N57 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Raf1Q99N57 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Gm7860-201ENSMUST00000121190 879 ntBASIC16.25■□□□□ 0.19
Raf1Q99N57 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Raf1Q99N57 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.25■□□□□ 0.19
Raf1Q99N57 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.25■□□□□ 0.19
Raf1Q99N57 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raf1Q99N57 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Raf1Q99N57 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Raf1Q99N57 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.24■□□□□ 0.19
Raf1Q99N57 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.24■□□□□ 0.19
Raf1Q99N57 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.24■□□□□ 0.19
Raf1Q99N57 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raf1Q99N57 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms