Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.64■□□□□ 0.42
Rnf111Q99ML9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf111Q99ML9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf111Q99ML9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf111Q99ML9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf111Q99ML9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf111Q99ML9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf111Q99ML9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf111Q99ML9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf111Q99ML9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf111Q99ML9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.58■□□□□ 0.41
Rnf111Q99ML9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf111Q99ML9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf111Q99ML9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf111Q99ML9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms