Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.04■□□□□ 0.32
Nkx6-1Q99MA9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx6-1Q99MA9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-1Q99MA9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-1Q99MA9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Gm18032-201ENSMUST00000222541 538 ntBASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-1Q99MA9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Gm9103-201ENSMUST00000119371 405 ntBASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Mir6349-201ENSMUST00000184059 97 ntBASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Gm45058-201ENSMUST00000205810 766 ntBASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-1Q99MA9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-1Q99MA9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms