Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Tgds-204ENSMUST00000228543 1594 ntBASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Flg-201ENSMUST00000050758 1488 ntBASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdha9Q91Y11 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Gm2559-201ENSMUST00000201323 363 ntBASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha9Q91Y11 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha9Q91Y11 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha9Q91Y11 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.33■□□□□ 0.68
Pcdha9Q91Y11 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha9Q91Y11 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Gm38285-201ENSMUST00000192928 922 ntBASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Zfp783-201ENSMUST00000095946 670 ntBASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Dio3-201ENSMUST00000097228 1449 ntBASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha9Q91Y11 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms