Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb1Q91Y08 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Gm7291-201ENSMUST00000199147 382 ntBASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb1Q91Y08 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb1Q91Y08 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb1Q91Y08 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb1Q91Y08 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Fst-202ENSMUST00000223640 2612 ntBASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb1Q91Y08 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Gm29257-201ENSMUST00000186115 639 ntBASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pcdhb1Q91Y08 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb1Q91Y08 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms