Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb3Q91XZ7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.14■□□□□ 0.49
Pcdhb3Q91XZ7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb3Q91XZ7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb3Q91XZ7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb3Q91XZ7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb3Q91XZ7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb3Q91XZ7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms