Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb4Q91XZ6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb4Q91XZ6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb4Q91XZ6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb4Q91XZ6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb4Q91XZ6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb4Q91XZ6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb4Q91XZ6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms