Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga6Q91XY2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga6Q91XY2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga6Q91XY2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga6Q91XY2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga6Q91XY2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga6Q91XY2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdhga6Q91XY2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms