Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trex1Q91XB0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trex1Q91XB0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 Gm12382-201ENSMUST00000122005 922 ntBASIC20.91■□□□□ 0.94
Trex1Q91XB0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trex1Q91XB0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trex1Q91XB0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.89■□□□□ 0.94
Trex1Q91XB0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trex1Q91XB0 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.89■□□□□ 0.94
Trex1Q91XB0 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.89■□□□□ 0.94
Trex1Q91XB0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trex1Q91XB0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trex1Q91XB0 Gm6433-201ENSMUST00000118634 875 ntBASIC20.89■□□□□ 0.93
Trex1Q91XB0 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.89■□□□□ 0.93
Trex1Q91XB0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Trex1Q91XB0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trex1Q91XB0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.88■□□□□ 0.93
Trex1Q91XB0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.88■□□□□ 0.93
Trex1Q91XB0 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.88■□□□□ 0.93
Trex1Q91XB0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trex1Q91XB0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Gm30025-201ENSMUST00000218555 728 ntBASIC20.87■□□□□ 0.93
Trex1Q91XB0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.87■□□□□ 0.93
Trex1Q91XB0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trex1Q91XB0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trex1Q91XB0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.85■□□□□ 0.93
Trex1Q91XB0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.85■□□□□ 0.93
Trex1Q91XB0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.85■□□□□ 0.93
Trex1Q91XB0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms