Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18■□□□□ 0.47
Vsx1Q91V10 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18■□□□□ 0.47
Vsx1Q91V10 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18■□□□□ 0.47
Vsx1Q91V10 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Vsx1Q91V10 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vsx1Q91V10 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.98■□□□□ 0.47
Vsx1Q91V10 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.98■□□□□ 0.47
Vsx1Q91V10 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Vsx1Q91V10 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.97■□□□□ 0.47
Vsx1Q91V10 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vsx1Q91V10 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.96■□□□□ 0.47
Vsx1Q91V10 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vsx1Q91V10 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vsx1Q91V10 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vsx1Q91V10 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vsx1Q91V10 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vsx1Q91V10 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms