Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm6420-201ENSMUST00000193885 723 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm7514-201ENSMUST00000209475 934 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Nespas-201ENSMUST00000143738 1083 ntBASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Gm10033-202ENSMUST00000211874 928 ntBASIC15.23■□□□□ 0.03
H1fooQ8VIK3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
H1fooQ8VIK3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Grk6-206ENSMUST00000224995 2971 ntBASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H1fooQ8VIK3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H1fooQ8VIK3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.21■□□□□ 0.02
H1fooQ8VIK3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
H1fooQ8VIK3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H1fooQ8VIK3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms