Protein–RNA interactions for Protein: Q8VH37

Hdac8, Histone deacetylase 8, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac8Q8VH37 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac8Q8VH37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
Hdac8Q8VH37 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac8Q8VH37 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.75■□□□□ 0.43
Hdac8Q8VH37 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac8Q8VH37 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Gm43183-201ENSMUST00000200632 547 ntBASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac8Q8VH37 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Gm715-201ENSMUST00000117865 831 ntBASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac8Q8VH37 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Mir6982-201ENSMUST00000184354 68 ntBASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Gm42545-201ENSMUST00000202755 922 ntBASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac8Q8VH37 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac8Q8VH37 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac8Q8VH37 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms