Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Mir7071-201ENSMUST00000184847 69 ntBASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4aQ8VEJ9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4aQ8VEJ9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vps4aQ8VEJ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps4aQ8VEJ9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps4aQ8VEJ9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Vps4aQ8VEJ9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.58■□□□□ 0.41
Vps4aQ8VEJ9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4aQ8VEJ9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps4aQ8VEJ9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms