Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa1Q8VEE4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa1Q8VEE4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Gm13241-201ENSMUST00000094493 780 ntBASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.27■□□□□ 0.52
Rpa1Q8VEE4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpa1Q8VEE4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rpa1Q8VEE4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpa1Q8VEE4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms