Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Gm12085-201ENSMUST00000119263 940 ntBASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Gm38027-201ENSMUST00000192315 235 ntBASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Gm18669-201ENSMUST00000216049 778 ntBASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lmcd1Q8VEE1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Gm5587-201ENSMUST00000206270 674 ntBASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lmcd1Q8VEE1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.39■□□□□ 0.7
Lmcd1Q8VEE1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lmcd1Q8VEE1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lmcd1Q8VEE1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Gm43514-201ENSMUST00000198852 424 ntBASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lmcd1Q8VEE1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Gm16061-201ENSMUST00000122167 857 ntBASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lmcd1Q8VEE1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Gm18958-201ENSMUST00000174258 762 ntBASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lmcd1Q8VEE1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Gm9013-201ENSMUST00000132939 882 ntBASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lmcd1Q8VEE1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lmcd1Q8VEE1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms