Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Gm13168-201ENSMUST00000121771 632 ntBASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Gm8520-201ENSMUST00000186517 868 ntBASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retreg1dQ8VE91 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg1dQ8VE91 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.96■□□□□ 0.46
Retreg1dQ8VE91 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Gm12896-201ENSMUST00000118430 226 ntBASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retreg1dQ8VE91 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Gm27275-201ENSMUST00000184318 272 ntBASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg1dQ8VE91 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg1dQ8VE91 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Grk6-206ENSMUST00000224995 2971 ntBASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg1dQ8VE91 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms