Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Gm10252-201ENSMUST00000209541 832 ntBASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndc1Q8VCB1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndc1Q8VCB1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gm5643-201ENSMUST00000117081 966 ntBASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndc1Q8VCB1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndc1Q8VCB1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms