Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps39Q8R5L3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps39Q8R5L3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps39Q8R5L3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps39Q8R5L3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.21■□□□□ 0.5
Vps39Q8R5L3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Vps39Q8R5L3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps39Q8R5L3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps39Q8R5L3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms