Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup35Q8R4R6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup35Q8R4R6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup35Q8R4R6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup35Q8R4R6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nup35Q8R4R6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Tgds-204ENSMUST00000228543 1594 ntBASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup35Q8R4R6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nup35Q8R4R6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms