Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna3Q8R4G9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.86■□□□□ 0.45
Chrna3Q8R4G9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chrna3Q8R4G9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna3Q8R4G9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chrna3Q8R4G9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chrna3Q8R4G9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Flg-201ENSMUST00000050758 1488 ntBASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms