Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.36■□□□□ 0.53
Slf1Q8R3P9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slf1Q8R3P9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.35■□□□□ 0.53
Slf1Q8R3P9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slf1Q8R3P9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slf1Q8R3P9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slf1Q8R3P9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.33■□□□□ 0.52
Slf1Q8R3P9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slf1Q8R3P9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
Slf1Q8R3P9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Serp2-204ENSMUST00000228055 705 ntBASIC18.31■□□□□ 0.52
Slf1Q8R3P9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms