Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nup58Q8R332 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.47■□□□□ 0.71
Nup58Q8R332 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Nup58Q8R332 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup58Q8R332 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.47■□□□□ 0.71
Nup58Q8R332 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.46■□□□□ 0.71
Nup58Q8R332 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nup58Q8R332 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup58Q8R332 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.45■□□□□ 0.7
Nup58Q8R332 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nup58Q8R332 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.45■□□□□ 0.7
Nup58Q8R332 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.45■□□□□ 0.7
Nup58Q8R332 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup58Q8R332 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nup58Q8R332 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nup58Q8R332 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.44■□□□□ 0.7
Nup58Q8R332 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Gm38205-201ENSMUST00000192243 258 ntBASIC19.44■□□□□ 0.7
Nup58Q8R332 Gm37179-201ENSMUST00000194862 823 ntBASIC19.44■□□□□ 0.7
Nup58Q8R332 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Nup58Q8R332 Gm9988-201ENSMUST00000069786 435 ntBASIC19.44■□□□□ 0.7
Nup58Q8R332 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nup58Q8R332 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup58Q8R332 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.43■□□□□ 0.7
Nup58Q8R332 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
Nup58Q8R332 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.43■□□□□ 0.7
Nup58Q8R332 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup58Q8R332 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nup58Q8R332 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup58Q8R332 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.41■□□□□ 0.7
Nup58Q8R332 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup58Q8R332 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms