Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trim29Q8R2Q0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Gm6365-201ENSMUST00000054711 744 ntBASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim29Q8R2Q0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 Gm27405-201ENSMUST00000184201 112 ntBASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim29Q8R2Q0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim29Q8R2Q0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Gm22325-201ENSMUST00000158904 308 ntBASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim29Q8R2Q0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim29Q8R2Q0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Trim29Q8R2Q0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 200.3 ms