Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.34■■□□□ 1.33
Chmp7Q8R1T1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Odf3b-204ENSMUST00000227834 930 ntBASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chmp7Q8R1T1 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.33■■□□□ 1.32
Chmp7Q8R1T1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Gm10231-201ENSMUST00000181584 441 ntBASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Gm10175-202ENSMUST00000208752 441 ntBASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Timm23-208ENSMUST00000226683 750 ntBASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.32■■□□□ 1.32
Chmp7Q8R1T1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Chmp7Q8R1T1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Chmp7Q8R1T1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chmp7Q8R1T1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chmp7Q8R1T1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chmp7Q8R1T1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Gm3375-201ENSMUST00000203929 796 ntBASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms