Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zcchc9Q8R1J3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zcchc9Q8R1J3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zcchc9Q8R1J3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zcchc9Q8R1J3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Zcchc9Q8R1J3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zcchc9Q8R1J3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms