Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.24■■□□□ 1.15
Sf3a1Q8K4Z5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Sf3a1Q8K4Z5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sf3a1Q8K4Z5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Sf3a1Q8K4Z5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Sf3a1Q8K4Z5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.2■■□□□ 1.15
Sf3a1Q8K4Z5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sf3a1Q8K4Z5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sf3a1Q8K4Z5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sf3a1Q8K4Z5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 Gm2399-201ENSMUST00000104944 225 ntBASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 Gm20049-201ENSMUST00000219950 730 ntBASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sf3a1Q8K4Z5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms