Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col23a1Q8K4G2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Col23a1Q8K4G2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Gm27389-201ENSMUST00000183622 195 ntBASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Col23a1Q8K4G2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Col23a1Q8K4G2 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.21■■□□□ 1.15
Col23a1Q8K4G2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.21■■□□□ 1.15
Col23a1Q8K4G2 Gm7370-201ENSMUST00000219471 767 ntBASIC22.21■■□□□ 1.15
Col23a1Q8K4G2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Col23a1Q8K4G2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gm13474-201ENSMUST00000122466 815 ntBASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Mzt1-203ENSMUST00000227948 952 ntBASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col23a1Q8K4G2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Col23a1Q8K4G2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Gm18958-201ENSMUST00000174258 762 ntBASIC22.18■■□□□ 1.14
Col23a1Q8K4G2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Gm43514-201ENSMUST00000198852 424 ntBASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Gm4974-201ENSMUST00000209974 875 ntBASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Gm7791-201ENSMUST00000219066 539 ntBASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col23a1Q8K4G2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Col23a1Q8K4G2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms