Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.84■□□□□ 0.45
Alms1Q8K4E0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Alms1Q8K4E0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Alms1Q8K4E0 Gm42545-201ENSMUST00000202755 922 ntBASIC17.83■□□□□ 0.44
Alms1Q8K4E0 Gm3375-201ENSMUST00000203929 796 ntBASIC17.83■□□□□ 0.44
Alms1Q8K4E0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Alms1Q8K4E0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Alms1Q8K4E0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Alms1Q8K4E0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Alms1Q8K4E0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alms1Q8K4E0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Gm6345-202ENSMUST00000180900 204 ntBASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.8■□□□□ 0.44
Alms1Q8K4E0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alms1Q8K4E0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alms1Q8K4E0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Gm17971-201ENSMUST00000190239 806 ntBASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Grk6-206ENSMUST00000224995 2971 ntBASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Ank2-226ENSMUST00000189368 339 ntBASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.78■□□□□ 0.44
Alms1Q8K4E0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms