Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.19■□□□□ 0.34
Clrn1Q8K445 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.19■□□□□ 0.34
Clrn1Q8K445 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Clrn1Q8K445 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Gm6211-202ENSMUST00000167849 925 ntBASIC17.18■□□□□ 0.34
Clrn1Q8K445 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.18■□□□□ 0.34
Clrn1Q8K445 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.18■□□□□ 0.34
Clrn1Q8K445 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn1Q8K445 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.17■□□□□ 0.34
Clrn1Q8K445 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Clrn1Q8K445 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Clrn1Q8K445 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.16■□□□□ 0.34
Clrn1Q8K445 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn1Q8K445 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.15■□□□□ 0.34
Clrn1Q8K445 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clrn1Q8K445 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn1Q8K445 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.14■□□□□ 0.33
Clrn1Q8K445 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn1Q8K445 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Gm12933-201ENSMUST00000120203 872 ntBASIC17.13■□□□□ 0.33
Clrn1Q8K445 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clrn1Q8K445 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clrn1Q8K445 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms