Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn1Q8K0T0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.98■□□□□ 0.95
Rtn1Q8K0T0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn1Q8K0T0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Gm2399-201ENSMUST00000104944 225 ntBASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rtn1Q8K0T0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn1Q8K0T0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn1Q8K0T0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn1Q8K0T0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms