Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.66■□□□□ 0.9
Syne4Q8CII8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Syne4Q8CII8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.65■□□□□ 0.9
Syne4Q8CII8 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.65■□□□□ 0.9
Syne4Q8CII8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.65■□□□□ 0.9
Syne4Q8CII8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Syne4Q8CII8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.64■□□□□ 0.89
Syne4Q8CII8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syne4Q8CII8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.64■□□□□ 0.89
Syne4Q8CII8 Gm33142-201ENSMUST00000193913 867 ntBASIC20.64■□□□□ 0.89
Syne4Q8CII8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syne4Q8CII8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syne4Q8CII8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Mir5130-201ENSMUST00000175160 84 ntBASIC20.63■□□□□ 0.89
Syne4Q8CII8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.63■□□□□ 0.89
Syne4Q8CII8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syne4Q8CII8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Syne4Q8CII8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
Syne4Q8CII8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syne4Q8CII8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Gm2274-201ENSMUST00000184539 609 ntBASIC20.6■□□□□ 0.89
Syne4Q8CII8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syne4Q8CII8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syne4Q8CII8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms