Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox30Q8CGW4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.95■□□□□ 0.79
Sox30Q8CGW4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Idnk-204ENSMUST00000226010 1898 ntBASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox30Q8CGW4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox30Q8CGW4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox30Q8CGW4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox30Q8CGW4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox30Q8CGW4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sox30Q8CGW4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox30Q8CGW4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sox30Q8CGW4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.91■□□□□ 0.78
Sox30Q8CGW4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms