Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Calcoco1Q8CGU1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Calcoco1Q8CGU1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.92■□□□□ 0.62
Calcoco1Q8CGU1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Gm8495-201ENSMUST00000188740 694 ntBASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Calcoco1Q8CGU1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.9■□□□□ 0.62
Calcoco1Q8CGU1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Calcoco1Q8CGU1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Calcoco1Q8CGU1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.89■□□□□ 0.62
Calcoco1Q8CGU1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.89■□□□□ 0.61
Calcoco1Q8CGU1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms